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College of Arts and Sciences
Department of Ecology & Evolution
Department of Ecology and EvolutionE&E Publications2019 Publications

2019 Publications from the Department of Ecology and Evolution

  • Akçakaya HR, Rodrigues ASL, Keith DA, Milner-Gulland EJ, Sanderson EW, Hedges S, Mallon DP, Grace MK, Long B, Meijaard E, Stephenson PJ. 2019. Assessing ecological function in the context of species recovery. Conservation Biology. DOI: 10.1111/cobi.13425. 
  • Armenteras D, Negret P, Melgarejo LF, Lakes TM, Londoño MC, García J, Krueger T, Baumann M, Dávalos LM. 2019. Curb land grabbing to save the Amazon. Nature Ecology & Evolution 3:1497. DOI: 10.1038/s41559-019-1020-1. 
  • Beckmann M, Gerstner K, Akin-Fajiye M, Ceausu S, Kambach S, Kinlock NL, Phillips HRP, Verhagen W, Gurevitch J, Klotz S, Newbold T, Verburg PH, Winter M, Seppel R. 2019. Conventional land-use intensification reduces species richness and increases production: A global meta-analysis. Global Change Biology 25:1941–1956. DOI: 10.1111/gcb.14606. 
  • Borowicz A, Le H, Humphries G, Nehls G, Höschle C, Kosarev V, Lynch HJ. 2019. Aerial-trained deep learning networks for surveying cetaceans from satellite imagery. PloS One 14:e0212532. DOI: 10.1371/journal.pone.0212532. 
  • Brooks TM, Pimm SL, Akçakaya HR, Buchanan GM, Butchart SHM, Foden W, Hilton-Taylor C, Hoffmann M, Jenkins CN, Joppa L, Li BV, Menon V, Ocampo-Peñuela N, Rondinini C. 2019. Measuring Terrestrial Area of Habitat (AOH) and Its Utility for the IUCN Red List. Trends in Ecology & Evolution 34:977–986. DOI: 10.1016/j.tree.2019.06.009. 
  • Burgman M, Fuwen W, Esler K, Akçakaya R, McCarthy M, Rondinini C, Main E, Marsh H, Jarrad F, Murcia C, Game E, Schwartz M. 2019. Open access and academic imperialism. Conservation Biology 33:5–6. DOI: 10.1111/cobi.13248. 
  • Cai L, Xi Z, Amorim AM, Sugumaran M, Rest JS, Liu L, Davis CC. 2019. Widespread ancient whole-genome duplications in Malpighiales coincide with Eocene global climatic upheaval. New Phytologist 221:565–576. DOI: 10.1111/nph.15357. 
  • Collier JL, Rest JS. 2019. Swimming, gliding, and rolling toward the mainstream: cell biology of marine protists. Molecular Biology of the Cell 30:1245–1248. DOI: 10.1091/mbc.E18-11-0724. 
  • Dávalos LM, Lancaster WC, Núñez-Novas MS, León YM, Lei B, Flanders J, Russell AL. 2019. A coalescent-based estimator of genetic drift, and acoustic divergence in the Pteronotus parnellii species complex. Heredity 122:417–427. DOI: 10.1038/s41437-018-0129-3. 
  • Grace M, Akçakaya HR, Bennett E, Hilton-Taylor C, Long B, Milner-Gulland EJ, Young R, Hoffmann M. 2019. Using historical and palaeoecological data to inform ambitious species recovery targets. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 374:20190297. DOI: 10.1098/rstb.2019.0297. 
  • Hanson SM, Georghiou G, Thakur MK, Miller WT, Rest JS, Chodera JD, Seeliger MA. 2019. What Makes a Kinase Promiscuous for Inhibitors? Cell Chemical Biology 26:390-399.e5. DOI: 10.1016/j.chembiol.2018.11.005. 
  • Hollister JD, Greiner S, Johnson MTJ, Wright SI. 2019. Hybridization and a loss of sex shape genome-wide diversity and the origin of species in the evening primroses (Oenothera, Onagraceae). New Phytologist 224:1372–1380. DOI: 10.1111/nph.16053.
  • Lim MCW, Witt CC, Graham CH, Dávalos LM. 2019. Parallel Molecular Evolution in Pathways, Genes, and Sites in High-Elevation Hummingbirds Revealed by Comparative Transcriptomics. Genome Biology and Evolution 11:1552–1572. DOI: 10.1093/gbe/evz101. 
  • McCarthy MA, Burgman MA, Wei F, Jarrad FC, Rondinini C, Murcia C, Marsh HD, Akçakaya HR, Esler KJ, Game ET, Schwartz MW. 2019. Plan S and publishing: reply to Lehtomäki et al. 2019. Conservation Biology 33:1203–1204. DOI: 10.1111/cobi.13377. 
  • McDowall PS, Lynch HJ. 2019. When the “selfish herd” becomes the “frozen herd”: spatial dynamics and population persistence in a colonial seabird. Ecology 100:e02823. DOI: 10.1002/ecy.2823. 
  • Mech AM, Thomas KA, Marsico TD, Herms DA, Allen CR, Ayres MP, Gandhi KJK, Gurevitch J, Havill NP, Hufbauer RA, Liebhold AM, Raffa KF, Schulz AN, Uden DR, Tobin PC. 2019. Evolutionary history predicts high-impact invasions by herbivorous insects. Ecology and Evolution 9:12216–12230. DOI: 10.1002/ece3.5709. 
  • Peng S, Kinlock NL, Gurevitch J, Peng S. 2019. Correlation of native and exotic species richness: a global meta-analysis finds no invasion paradox across scales. Ecology 100:e02552. DOI: 10.1002/ecy.2552. 
  • Stephenson PJ, Grace MK, Akçakaya HR, Rodrigues ASL, Long B, Mallon DP, Meijaard E, Rodriguez JP, Young RP, Brooks TM, Hilton-Taylor C. 2019. Defining the indigenous ranges of species to account for geographic and taxonomic variation in the history of human impacts: reply to Sanderson 2019. Conservation Biology 33:1211–1213. DOI: 10.1111/cobi.13400. 
  • Wilkins LGE, Leray M, O’Dea A, Yuen B, Peixoto RS, Pereira TJ, Bik HM, Coil DA, Duffy JE, Herre EA, Lessios HA, Lucey NM, Mejia LC, Rasher DB, Sharp KH, Sogin EM, Thacker RW, Thurber RV, Wcislo WT, Wilbanks EG, Eisen JA. 2019. Host-associated microbiomes drive structure and function of marine ecosystems. PLoS Biology 17:e3000533. DOI: 10.1371/journal.pbio.3000533. 
  • Yohe LR, Davies KTJ, Rossiter SJ, Dávalos LM. 2019. Expressed Vomeronasal Type-1 Receptors (V1rs) in Bats Uncover Conserved Sequences Underlying Social Chemical Signaling. Genome Biology and Evolution 11:2741–2749. DOI: 10.1093/gbe/evz179. 
  • Yohe LR, Devanna P, Davies KTJ, Potter JHT, Rossiter SJ, Teeling EC, Vernes SC, Dávalos LM. 2019b. Tissue Collection of Bats for -Omics Analyses and Primary Cell Culture. Journal of Visualized Experiments. DOI: 10.3791/59505. 
  • Yohe LR, Liu L, Dávalos LM, Liberles DA. 2019c. Protocols for the Molecular Evolutionary Analysis of Membrane Protein Gene Duplicates. Methods in Molecular Biology (Clifton, N.J.) 1851:49–62. DOI: 10.1007/978-1-4939-8736-8_3.
E&E Publications
E&E Publications